The Belgian Evangelical Mission works throughout Belgium. The Flemish Council, led by the Director for Flanders, is in charge of all decisions and pastoral care in Flanders and German-speaking Belgium. The French Council, led by the Director for French-speaking Director, gives leadership and is responsible for pastoral care in Wallonia and Brussels.
The National Council, formed by members of both Flemish and French Councils, establishes a common vision while the Direction Council oversees the day-to-day operations of the Mission.
BEM workers from a same region meet regularly for share and prayer in regional groups. The regional director represents them in the Flemish or French Council.